Publications

Complete bibliography at Google Scholar


Rojas M; Luz-Crawford P; Soto-Rifo R; Reyes-Cerpa S; Toro-Ascuy D, 2021. The Landscape of IFN/ISG Signaling in HIV-1-Infected Macrophages and Its Possible Role in the HIV-1 Latency.  Cells 10.

Bueno SM; Abarca K; González PA; Gálvez NMS; Soto JA; Duarte LF; Schultz BM; Pacheco GA; González LA; Vázquez Y; Ríos M; Melo-González F; Rivera-Pérez D; Iturriaga C; Urzúa M; Domínguez A; Andrade CA; Berrios RV; Canedo-Marroquín G; Covián C; Moreno-Tapia D; Saavedra F; Vallejos OP; Donato P; Espinoza P; Fuentes D; González M; Guzmán P; Muñoz-Venturelli P; Pérez CM; Potin M; Rojas Á; Fasce R; Fernández J; Mora J; Ramírez E; Gaete-Argel A; Oyarzún-Arrau A; Valiente-Echeverría F; Soto-Rifo R; Weiskopf D; Sette A; Zeng G; Meng W; González-Aramundiz JV; Kalergis AM, 2021. Safety and Immunogenicity of an Inactivated SARS-CoV-2 Vaccine in a Subgroup of Healthy Adults in Chile.  Clin Infect Dis.

Hernández-Díaz T; Valiente-Echeverría F; Soto-Rifo R, 2021. RNA Helicase DDX3: A Double-Edged Sword for Viral Replication and Immune Signaling.  Microorganisms 9.

Peña M; Ampuero M; Garcés C; Gaggero A; García P; Velasquez MS; Luza R; Alvarez P; Paredes F; Acevedo J; Farfán MJ; Solari S; Soto-Rifo R; Valiente-Echeverría F, 2021. Performance of SARS-CoV-2 rapid antigen test compared with real-time RT-PCR in asymptomatic individuals.  Int J Infect Dis 107:201-204

Gaete-Argel A; Velásquez F; Márquez CL; Rojas-Araya B; Bueno-Nieto C; Marín-Rojas J; Cuevas-Zúñiga M; Soto-Rifo R; Valiente-Echeverría F, 2021. Tellurite Promotes Stress Granules and Nuclear SG-Like Assembly in Response to Oxidative Stress and DNA Damage.  Front Cell Dev Biol 9:622057

Balcells ME; Rojas L; Le Corre N; Martínez-Valdebenito C; Ceballos ME; Ferrés M; Chang M; Vizcaya C; Mondaca S; Huete Á; Castro R; Sarmiento M; Villarroel L; Pizarro A; Ross P; Santander J; Lara B; Ferrada M; Vargas-Salas S; Beltrán-Pavez C; Soto-Rifo R; Valiente-Echeverría F; Caglevic C; Mahave M; Selman C; Gazitúa R; Briones JL; Villarroel-Espindola F; Balmaceda C; Espinoza MA; Pereira J; Nervi B, 2021. Early versus deferred anti-SARS-CoV-2 convalescent plasma in patients admitted for COVID-19: A randomized phase II clinical trial.  PLoS Med 18(3):e1003415

González-Stegmaier R; Cereceda K; Briones JL; Beltran-Pávez C; Oyarzún-Arrau A; Riquelme-Barrios S; Selman C; Yarad F; Mahave M; Caglevic C; Morales R; Aguirre A; Valiente-Echeverría F; Soto-Rifo R; Marsiglia H; Gazitua R; Villarroel-Espindola F, 2021. Seroconversion and Abundance of IgG Antibodies against S1-RBD of SARS-CoV-2 and Neutralizing Activity in the Chilean Population.  J Immunol Res 2021:6680337

Beltrán-Pavez C; Riquelme-Barrios S; Oyarzún-Arrau A; Gaete-Argel A; González-Stegmaier R; Cereceda-Solis K; Aguirre A; Travisany D; Palma-Vejares R; Barriga GP; Gaggero A; Martínez-Valdebenito C; Corre NL; Ferrés M; Balcells ME; Fernandez J; Ramírez E; Villarroel F; Valiente-Echeverría F; Soto-Rifo R, 2021. Insights into neutralizing antibody responses in individuals exposed to SARS-CoV-2 in Chile.  Sci Adv 7.

García-de-Gracia F; Gaete-Argel A; Riquelme-Barrios S; Pereira-Montecinos C; Rojas-Araya B; Aguilera P; Oyarzún-Arrau A; Rojas-Fuentes C; Acevedo ML; Chnaiderman J; Valiente-Echeverría F; Toro-Ascuy D; Soto-Rifo R, 2021. CBP80/20-dependent translation initiation factor (CTIF) inhibits HIV-1 Gag synthesis by targeting the function of the viral protein Rev.  RNA Biol 18(5):745-758

Beltrán-Pavez C; Alonso-Palomares LA; Valiente-Echeverría F; Gaggero A; Soto-Rifo R; Barriga GP, 2021. Accuracy of a RT-qPCR SARS-CoV-2 detection assay without prior RNA extraction.  J Virol Methods 287:113969

Oyarzún-Arrau A; Alonso-Palomares L; Valiente-Echeverría F; Osorio F; Soto-Rifo R, 2020. Crosstalk between RNA Metabolism and Cellular Stress Responses during Zika Virus Replication.  Pathogens 9.

Zhu L; Liu X; Huang H; Avellán-Llaguno RD; Lazo MML; Gaggero A; Soto-Rifo R; Patiño L; Valencia-Avellan M; Diringer B; Huang Q; Zhu YG, 2020. Meteorological impact on the COVID-19 pandemic: A study across eight severely affected regions in South America.  Sci Total Environ 744:140881

Órdenes-Aenishanslins N; Anziani-Ostuni G; Monrás JP; Tello A; Bravo D; Toro-Ascuy D; Soto-Rifo R; Prasad PN; Pérez-Donoso JM, 2020. Bacterial Synthesis of Ternary CdSAg Quantum Dots through Cation Exchange: Tuning the Composition and Properties of Biological Nanoparticles for Bioimaging and Photovoltaic Applications.  Microorganisms 8.

Velásquez F; Marín-Rojas J; Soto-Rifo R; Torres A; Del Canto F; Valiente-Echeverría F, 2020. Escherichia coli HS and Enterotoxigenic Escherichia coli Hinder Stress Granule Assembly.  Microorganisms 9.

Dubois-Camacho K; Diaz-Jimenez D; De la Fuente M; Quera R; Simian D; Martínez M; Landskron G; Olivares-Morales M; Cidlowski JA; Xu X; Gao G; Xie J; Chnaiderman J; Soto-Rifo R; González MJ; Calixto A; Hermoso MA, 2019. Inhibition of miR-378a-3p by Inflammation Enhances IL-33 Levels: A Novel Mechanism of Alarmin Modulation in Ulcerative Colitis.  Front Immunol 10:2449

Gaete-Argel A; Márquez CL; Barriga GP; Soto-Rifo R; Valiente-Echeverría F, 2019. Strategies for Success. Viral Infections and Membraneless Organelles.  Front Cell Infect Microbiol 9:336

Rojas-Celis V; Valiente-Echeverría F; Soto-Rifo R; Toro-Ascuy D, 2019. New Challenges of HIV-1 Infection: How HIV-1 Attacks and Resides in the Central Nervous System.  Cells 8.

Fuentes-Villalobos F; Farkas C; Riquelme-Barrios S; Armijo ME; Soto-Rifo R; Pincheira R; Castro AF, 2019. DISC1 promotes translation maintenance during sodium arsenite-induced oxidative stress.  Biochim Biophys Acta Gene Regul Mech 1862(6):657-669

Levicán-Asenjo J; Soto-Rifo R; Aguayo F; Gaggero A; Leon O, 2019. Salmon cells SHK-1 internalize infectious pancreatic necrosis virus by macropinocytosis.  J Fish Dis 42(7):1035-1046

Toro-Ascuy D; Rojas-Araya B; García-de-Gracia F; Rojas-Fuentes C; Pereira-Montecinos C; Gaete-Argel A; Valiente-Echeverría F; Ohlmann T; Soto-Rifo R, 2018. A Rev-CBP80-eIF4AI complex drives Gag synthesis from the HIV-1 unspliced mRNA.  Nucleic Acids Res 46(21):11539-11552

Riquelme-Barrios S; Pereira-Montecinos C; Valiente-Echeverría F; Soto-Rifo R, 2018. Emerging Roles of N6-Methyladenosine on HIV-1 RNA Metabolism and Viral Replication.  Front Microbiol 9:576

Acevedo ML; García-de Gracia F; Miranda-Cárdenas C; Soto-Rifo R; Aguayo F; León O, 2018. Differences in the internalization of self-inactivating VSVG-pseudotyped murine leukemia virus-based vectors in human and murine cells.  J Virol Methods 255:14-22

Mengardi C; Limousin T; Ricci EP; Soto-Rifo R; Decimo D; Ohlmann T, 2017. microRNAs stimulate translation initiation mediated by HCV-like IRESes.  Nucleic Acids Res 45(8):4810-4824

Pereira-Montecinos C; Valiente-Echeverría F; Soto-Rifo R, 2017. Epitranscriptomic regulation of viral replication.  Biochim Biophys Acta Gene Regul Mech 1860(4):460-471

Levican J; Miranda-Cárdenas C; Soto-Rifo R; Aguayo F; Gaggero A; León O, 2017. Infectious pancreatic necrosis virus enters CHSE-214 cells via macropinocytosis.  Sci Rep 7(1):3068

Toro-Ascuy D; Rojas-Araya B; Valiente-Echeverría F; Soto-Rifo R, 2016. Interactions between the HIV-1 Unspliced mRNA and Host mRNA Decay Machineries.  Viruses 8.

Poblete-Durán N; Prades-Pérez Y; Vera-Otarola J; Soto-Rifo R; Valiente-Echeverría F, 2016. Who Regulates Whom? An Overview of RNA Granules and Viral Infections.  Viruses 8.

Fröhlich A; Rojas-Araya B; Pereira-Montecinos C; Dellarossa A; Toro-Ascuy D; Prades-Pérez Y; García-de-Gracia F; Garcés-Alday A; Rubilar PS; Valiente-Echeverría F; Ohlmann T; Soto-Rifo R, 2016. DEAD-box RNA helicase DDX3 connects CRM1-dependent nuclear export and translation of the HIV-1 unspliced mRNA through its N-terminal domain.  Biochim Biophys Acta 1859(5):719-30

Ajamian L; Abel K; Rao S; Vyboh K; García-de-Gracia F; Soto-Rifo R; Kulozik AE; Gehring NH; Mouland AJ, 2015. HIV-1 Recruits UPF1 but Excludes UPF2 to Promote Nucleocytoplasmic Export of the Genomic RNA.  Biomolecules 5(4):2808-39

Rojas-Araya B; Ohlmann T; Soto-Rifo R, 2015. Translational Control of the HIV Unspliced Genomic RNA.  Viruses 7(8):4326-51

Valiente-Echeverría F; Hermoso MA; Soto-Rifo R, 2015. RNA helicase DDX3: at the crossroad of viral replication and antiviral immunity.  Rev Med Virol 25(5):286-99

Peña N; Carrillo D; Muñoz JP; Chnaiderman J; Urzúa U; León O; Tornesello ML; Corvalán AH; Soto-Rifo R; Aguayo F, 2015. Tobacco smoke activates human papillomavirus 16 p97 promoter and cooperates with high-risk E6/E7 for oxidative DNA damage in lung cells.  PLoS One 10(4):e0123029

Soto-Rifo R; Valiente-Echeverria F; Rubilar PS; Garcia-de-Gracia F; Ricci EP; Limousin T; Décimo D; Mouland AJ; Ohlmann T, 2014. HIV-2 genomic RNA accumulates in stress granules in the absence of active translation.  Nucleic Acids Res 42(20):12861-75

de Breyne S; Soto-Rifo R; López-Lastra M; Ohlmann T, 2013. Translation initiation is driven by different mechanisms on the HIV-1 and HIV-2 genomic RNAs.  Virus Res 171(2):366-81

Ricci EP; Limousin T; Soto-Rifo R; Rubilar PS; Decimo D; Ohlmann T, 2013. miRNA repression of translation in vitro takes place during 43S ribosomal scanning.  Nucleic Acids Res 41(1):586-98

Soto-Rifo R; Ohlmann T, 2013. The role of the DEAD-box RNA helicase DDX3 in mRNA metabolism.  Wiley Interdiscip Rev RNA 4(4):369-85

Soto-Rifo R; Rubilar PS; Ohlmann T, 2013. The DEAD-box helicase DDX3 substitutes for the cap-binding protein eIF4E to promote compartmentalized translation initiation of the HIV-1 genomic RNA.  Nucleic Acids Res 41(12):6286-99

Soto-Rifo R; Rubilar PS; Limousin T; de Breyne S; Décimo D; Ohlmann T, 2012. DEAD-box protein DDX3 associates with eIF4F to promote translation of selected mRNAs.  EMBO J 31(18):3745-56

Vera-Otarola J; Solis L; Soto-Rifo R; Ricci EP; Pino K; Tischler ND; Ohlmann T; Darlix JL; López-Lastra M, 2012. The Andes hantavirus NSs protein is expressed from the viral small mRNA by a leaky scanning mechanism.  J Virol 86(4):2176-87

Soto-Rifo R; Limousin T; Rubilar PS; Ricci EP; Décimo D; Moncorgé O; Trabaud MA; André P; Cimarelli A; Ohlmann T, 2012. Different effects of the TAR structure on HIV-1 and HIV-2 genomic RNA translation.  Nucleic Acids Res 40(6):2653-67

Alais S; Soto-Rifo R; Balter V; Gruffat H; Manet E; Schaeffer L; Darlix JL; Cimarelli A; Raposo G; Ohlmann T; Leblanc P, 2012. Functional mechanisms of the cellular prion protein (PrP(C)) associated anti-HIV-1 properties.  Cell Mol Life Sci 69(8):1331-52

Ricci EP; Limousin T; Soto-Rifo R; Allison R; Pöyry T; Decimo D; Jackson RJ; Ohlmann T, 2011. Activation of a microRNA response in trans reveals a new role for poly(A) in translational repression.  Nucleic Acids Res 39(12):5215-31

Vera-Otarola J; Soto-Rifo R; Ricci EP; Ohlmann T; Darlix JL; López-Lastra M, 2010. The 3' untranslated region of the Andes hantavirus small mRNA functionally replaces the poly(A) tail and stimulates cap-dependent translation initiation from the viral mRNA.  J Virol 84(19):10420-4

Charnay N; Ivanyi-Nagy R; Soto-Rifo R; Ohlmann T; López-Lastra M; Darlix JL, 2009. Mechanism of HIV-1 Tat RNA translation and its activation by the Tat protein.  Retrovirology 6:74

Balvay L; Soto Rifo R; Ricci EP; Decimo D; Ohlmann T, 2009. Structural and functional diversity of viral IRESes.  Biochim Biophys Acta 1789(9-10):542-57

Ricci EP; Soto Rifo R; Herbreteau CH; Decimo D; Ohlmann T, 2008. Lentiviral RNAs can use different mechanisms for translation initiation.  Biochem Soc Trans 36(Pt 4):690-3

Soto Rifo R; Ricci EP; Décimo D; Moncorgé O; Ohlmann T, 2007. Back to basics: the untreated rabbit reticulocyte lysate as a competitive system to recapitulate cap/poly(A) synergy and the selective advantage of IRES-driven translation.  Nucleic Acids Res 35(18):e121

Dieterich K; Soto Rifo R; Faure AK; Hennebicq S; Ben Amar B; Zahi M; Perrin J; Martinez D; Sèle B; Jouk PS; Ohlmann T; Rousseaux S; Lunardi J; Ray PF, 2007. Homozygous mutation of AURKC yields large-headed polyploid spermatozoa and causes male infertility.  Nat Genet 39(5):661-5

Publication list retrieved from NCBI using ImpactPubs

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